Check Q250989 for info on Installing the ADC on a Windows 2000 Domain Controller That Also Runs Exchange Server.
Unattended Installations of Exchange 5.5
Q188625 details the process for configuring your Unattended Exchange Server 5.5 Setup.
Backing up Exchange
If you insist on running a scheduled offline backup, put
NET STOP MSEXCHANGESA /Y NET STOP MSEXCHANGESA /Y NET STOP MSEXCHANGESA /Y
at the beginning of your script to make sure the services are turned off. Yes, that's three times.
Upgrading from Exchange 5.5 to Exchange 2000
Here are just a few of the articles on Technet that deal with upgrading from 5.5 to 2000:
Q259912: Prerequisites for Upgrading Exchange Server 5.5 to Exchange 2000 Server
Q242991: Exchange Server 5.5 SP3 Schema Changes for Exchange 2000 Server
Q259712: Upgrading to Exchange 2000--the Move Mailbox Method
Q264879: Upgrading to Exchange 2000--the Swing Upgrade Method
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